Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909257.1_cds_XP_016459475.1_53002
CDS Infomation

[gene=LOC107783028] [db_xref=GeneID:107783028] [protein=autophagy-related protein 13a-like] [protein_id=XP_016459475.1] [location=complement(join(30763..31075,37812..37993,38119..39438))] [gbkey=CDS]
Sequence

ATGGATTTTCAGAGTAACCCACAGGGGGGTGAACATGGAAGATTTGAGCAAATACTTGCT
CAATTTCTTCTTAAAAGCTTGCATATTATTTTGGACTCAAGGATTCCTTCGATACGACCT
TATGGTGGTAGTGGGGAAGTGAAAAAGAGTGACAGGTGGTTCAATTTGGTGTTGGGAGAT
CGTCCTGCTGTTCTTGATAACTTGAATCTGTTGCACCGGAATTTGGTGGAACCGATGATA
ATAGATATAATACTTGTTCAGGATAAATCTAGTACTTCATTGGAGCACGATTCGAGTACA
GGATTTGCAGGAGGATATACAGAAACTGTTGTGGAGAGGTGGGTTGTACAATGTGAGAAT
CGGAGGTCAATGGTTCCGCACATGGGTGATTCCTCTTTCAAAAAAACATACAAGAAATGC
ATTATACTACTCCGCTCGCTTTATTCAATGATGAGGCTCCTGCCTGCATTCAAGGCCTTC
AGGAAACTATCATTGTCAAGTCAGAGTTGTTATTTTGATATCAATTATAAAGTGTCTTCA
TTTAGTGAGCTATTCTCAAGGGCAGAGGAGGCGTTGATGAAGCAATATACTTTTATTCCA
GTTGATTCCCAGCAAGGCCGACTTGCTTTATCTGTGACATATCGAGAAAATCTGGCGGAC
TTCAACCTGGAGACTTCTGCATCCTTTCCGCCTGAGATCATTACAGATTATGTTGGCAGT
CCACTCACTGACCCTATGAGGTCATTCCCTTCTACCTCAATGGATAAGGGTCGTTCATTG
AGAAGGACACAGTCATCTTCTTCAGCACCAGTTCAGCGTCCACAAAGTTGGACCAGTGGT
CTCCTCAGGGCACCATCTTTACCTCAGCCATATGTTGGATCTCCACCTTTGTACCGTGCA
CCATATGAGCTTTCAACTTCGCCCAGTGATGTGTATGGACAGAGGGTTCCACCTAACTAC
AGATTGCCCACTCTCCAGAAAGCAACTAATTATGATGACGACCAGATTTCCCCTCCATTT
TCACCATCTCCATCTCCTTCTCCACCCACATATTTCTCAGGTGCAAATCCTGTGCAGACT
CGTTTGCGTTCAGAAACTGTTCCTGTCAGTATCCCTCATCCATTGATGGGCAGAAGTTCC
AAACACATATCTCCTAATTTGTCTGATCCAAACAGGCATTCTCTCCCACCTATGTCACCT
AGAAGCACAAAGCATGATTCTTCATCCCATGAATCCCCTTCTGGAATCAGGTCATCGAGA
AAAGTGGATTTGCTAAGGGCTCCAGAGTCAGATACTGGGACTACTAATCCTGGACAAAAG
GTGTCTACAGATGCTAGAGACGATTCAGGACGGTTTTCAGGTTTACTATCTTCAAGTGGT
TCACCACGTGCTGGGTTTTCTAGAAGTTCTAGCAGACTATCTTTTCAGGATGACTTGGAT
GACTGTGATTTTTCTTGTCCTTTTATAGTTGATGATGTTGATAATGCTGATTCTAGAGCC
AGAGAGACCCTTGATTCAAAAAAAGGTTCAGACACATCTTCTCAAGCATCTGCAACCACC
AGAAAATCTCAAGACGCTGCTGTAGGTGCCCTTGTTCACATGCTGAGGACTGCTCCCCCT
TTGCGTCAAGATTCAAGCTGTTATACCCCGCGTTCTGTAAAGACAGAAGTAGAGGGAGAA
ACTGGCACTGCATCAGGGTTCTATGTTCCTAGAAAGGCATTGGACGCATTGGAGGAGCTC
AAAACTTACACACAATTGAAAGATATGTTACTTTCCAAAAGCACAACCCGCTCGGGCAGT
GAGGGTGGAACTTAG

Peptide Sequence

PEP ID

XP_016459475.1
PEP Infomation

PREDICTED: autophagy-related protein 13a-like [Nicotiana tabacum]
Sequence

MDFQSNPQGGEHGRFEQILAQFLLKSLHIILDSRIPSIRPYGGSGEVKKSDRWFNLVLGD
RPAVLDNLNLLHRNLVEPMIIDIILVQDKSSTSLEHDSSTGFAGGYTETVVERWVVQCEN
RRSMVPHMGDSSFKKTYKKCIILLRSLYSMMRLLPAFKAFRKLSLSSQSCYFDINYKVSS
FSELFSRAEEALMKQYTFIPVDSQQGRLALSVTYRENLADFNLETSASFPPEIITDYVGS
PLTDPMRSFPSTSMDKGRSLRRTQSSSSAPVQRPQSWTSGLLRAPSLPQPYVGSPPLYRA
PYELSTSPSDVYGQRVPPNYRLPTLQKATNYDDDQISPPFSPSPSPSPPTYFSGANPVQT
RLRSETVPVSIPHPLMGRSSKHISPNLSDPNRHSLPPMSPRSTKHDSSSHESPSGIRSSR
KVDLLRAPESDTGTTNPGQKVSTDARDDSGRFSGLLSSSGSPRAGFSRSSSRLSFQDDLD
DCDFSCPFIVDDVDNADSRARETLDSKKGSDTSSQASATTRKSQDAAVGALVHMLRTAPP
LRQDSSCYTPRSVKTEVEGETGTASGFYVPRKALDALEELKTYTQLKDMLLSKSTTRSGS
EGGT

Transcript Sequence

Gene sequence data has not been registered.